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Lesson Description Pre-Alpha This lesson is in the pre-alpha phase, which means that it is in early development, but has not yet been taught.

    Lesson Description
    Genome Mining in Prokaryotes
    • Genome Mining in Prokaryotes
    • Key Points
    • Instructor Notes
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      • Discussion
      • Glossary
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    Genome Mining in Prokaryotes
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    Summary and Schedule
    1. Introduction to Genome Mining
    2. Secondary metabolite biosynthetic gene cluster identification
    3. Genome Mining Databases
    4. BGC Similarity Networks
    5. Homologous BGC Clusterization
    6. Finding Variation on Genomic Vicinities
    7. Evolutionary Genome Mining
    8. GATOR-GC: Genomic Assessment Tool for Orthologous Regions and Gene Clusters
    9. Metabolomics workshop
    10. Other Resources

    • Key Points
    • Instructor Notes
    • Extract All Images
    • Data

    • Discussion
    • Glossary

    See all in one page

    Instructor Notes

    The instructor notes provided for this lesson are described in the Instructor Notes page of the Comparative Genomics Workshop Overview page under the Extras tab.

    Introduction to Genome Mining


    Secondary metabolite biosynthetic gene cluster identification


    Genome Mining Databases


    BGC Similarity Networks


    Homologous BGC Clusterization


    Finding Variation on Genomic Vicinities


    Evolutionary Genome Mining


    GATOR-GC: Genomic Assessment Tool for Orthologous Regions and Gene Clusters


    Metabolomics workshop


    Other Resources



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