Image 1 of 1: ‘Screenshot of the cover page of the article named: Genomic adaptations in information processing underpin trophic strategy in a whole-ecosystem nutrient enrichment experiment’
Figure 2
Image 1 of 1: ‘Screenshot of the section of the article called Additional file. It shows the following text: Supplementary files: Source data 1. Data on the metagenomic traits and concentrations of seston chlorophyll a, phosphorus, nitrogen, and carbon in water samples from Lagunitas pond, Cuatro ciénegas, Mexico. Data availability: Raw sequence data and metadata have been submitted to the NCBI Sequence Read Archive, accessible through BioProject PRJEB228811. The following dataset was generated: Author(s): J Craig Venter Institute, Year: 2017, Dataset title: Cuatro Ciénegas Lagunita Fertilization Experiment, Database, and Identifier: NCBI BioProject, PREJB22811, Dataset URL’
Figure 3
Image 1 of 1: ‘Screenshot of the sections Select and Found 40 Items’
Notice on this page, there are three sections. “Common Fields”,
“Select”, and “Found 40 Items”. The sections “Select” and “Found 40
items” are shown in the next image. Select contains information about
the run size and the data and metadata table. The “Found 40 items
section” is a table where each row contains id numbers, an alias name,
size and links to data for one sample. Within “Found 40 Items”, click on
the first Run number (Column “Run”, Row “1”).
Figure 4
Image 1 of 1: ‘Screenshot of details for the selected run. It shows the details of the sequence file, a quality graph, the metadata, the Biosample details, and BioProject details.’
This will take you to a page that is a Run
Browser. Take a few minutes to examine some of the descriptions
on the page. In the image we see the SRA entry
ERR2143758. This metadata tab displays run’s quality
and GC content among other information.
Figure 5
Image 1 of 1: ‘Screenshot of the section Select, with two rows with the number of runs, bytes, bases, and buttons to download the Metadata and Accession List, one row for Total and one row for Selected.’
Use the browser’s back button to go back to the ‘previous page’.
As shown in the figure below, the second section of the page (“Select”)
has the Total row showing you the current number of
“Runs”, “Bytes”, and “Bases” in the dataset to date. On 2012-06-27,
there were 40 runs, 9.86 GBytes of data, and 19.61 Gbases.
