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DOI: 10.21105/jose.00209

Data Processing and Visualization for Metagenomics

Data Processing and Visualization for Metagenomics
Key Points
Instructor Notes
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Data Processing and Visualization for Metagenomics

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EPISODES

Summary and Schedule

1. Starting a Metagenomics Project

2. Assessing Read Quality

3. Trimming and Filtering

4. Metagenome Assembly

5. Metagenome Binning

6. Taxonomic Assignment

7. Exploring Taxonomy with R

8. Diversity Tackled With R

9. Taxonomic Analysis with R

10. Other Resources

Key Points
Instructor Notes
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Binning, Refinamiento y Desreplicación
Reconstrucción de Genomas a partir de Metagenomas (MAGs)
Clasificación taxonómica y Metabolismo
Amplicon metagenomics
Data

Discussion
Glossary - Data processing and visualization for metagenomics

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